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In a cell culture dish, a researcher studies medulloblastoma cells derived from a patient with PTCH loss-of-heterozygosity (LOH). When treated with a SMO inhibitor, most cells in culture die initially. After several weeks, in the presence of the inhibitor, a small number of cells begins to proliferate rapidly. Molecular analysis reveals that the Hedgehog pathway is reactivated despite drug treatment.
Which explanation best accounts for the observed drug resistance?